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Interestingly, laccase sensu stricto subfamily 2 is generally conserved in limited species of the Agaricales, such as L. edodes, F. velutipes, C. cinerea, A. bisporus and P. ostreatus (Fig. 1).
The developmental pathway for complex double-stranded DNA viruses is generally conserved in the prokaryotic and eukaryotic groups and includes a genome packaging step where viral DNA is inserted into a pre-formed procapsid shell.
The protein was generally conserved in non-mammalian vertebrates.
The meiotic genes found in mammals are generally conserved in other vertebrates, as well as invertebrates.
To confirm whether the importance of the GCS1 domain is generally conserved in other organisms, a similar GCS1 modification assay was performed in P. berghei GCS1 (PbGCS1).
However, their lytic genes are generally conserved in other family members, which can therefore tell us how EBV and KSHV are likely to work.
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In one case, the loss of the generally conserved cysteine in EC1 of Latimeria T2Rs is compensated by a cysteine in n-8 position, conserved only in Latimeria T2Rs.
Fam58 is generally conserved only in metazoans, although an ortholog is also found in S. arctica (Additional file 9: Figure S5).
Due to the lack of generally conserved motifs in this region the first exon is often missing in annotations of NIP genes.
Generally, conserved motifs in subtilase proteins from the same group are consistent with the results of the phylogenetic analyses.
In contrast to our study, Housley et al. investigated amplification success using generally conserved sequences in mammals and did not specifically use variable loci such as microsatellite loci.
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