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Groups generated from the two trees were generally congruent but not identical (Figs. 3a, 6b), because of the inconsistency in analysis of AOB through 16S rRNA and amoA genes (Purkhold et al. 2003).
These estimates are not generally congruent with the ranked deviations.
Together with the observation that the gene order tree is generally congruent with sequence-based and gene-content based cladograms, we conclude that gene order data is useful in phylogenetic reconstruction of closely related bacteria.
PCA analyses of all 414 mosquitoes taken either as individuals or as nine populations led to generally congruent results, differences were nonetheless found in the contributions to the total variance (Figure 3 and Figure S6).
An exon-based phylogenic analysis showed that the mainly non-coding exons 1 and 8 are, perhaps not surprisingly, fixing mutations faster than the coding exons 2+5, 3+6 and 4+7, which themselves showed a generally congruent topology (Figure 8).
However, a more detailed study of relationships within Procellariiformes, albeit based soley on the mitochondrial cytochrome b gene, by Nunn and Stanley [145] recovered an arrangement of procellariform families that is generally congruent with that of Hackett et al. [29], with the exception of the position of Oceanitinae.
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The NJ tree generally was congruent with known taxonomy, except for Ascolaimus and Araeolaimus, which showed long branches positioned closer to the basal node (Fig 4).
However, phylogenies of hosts and parasites are generally not congruent, indicating that interspecific horizontal transfer events characterise the evolutionary history of these selfish genetic elements [ 1].
While virus protein trees are generally well congruent with the host species at the phylum level, discrepancies appear in the detailed structure of the branch within phyla, possibly reflecting specific adaptations of host-pathogen interactions.
Permeability is shown to be congruent generally with the existing theory.
Indicating that RTs were generally faster on congruent trials, the trial type factor reached significance (F 1, 42) = 9.2; p <.005).
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