Further, a new study group of tables has been created to allow for generalized databasing of wet-lab experimental data.
While these generalized databases are valuable resources, more phyla-specific databases are also being developed to address the needs of specific research communities, including providing additional resources not available from the more generalized bacterial databases.
We have compared HypoxiaDB with some of the popularly used generalized databases like AmiGO (22), GeneCards (23) and ArrayExpress/GenAtlas (24).
HypoxiaDB is distinctive from other generalized databases: (i) it compiles tissue-specific protein expression changes under different levels and duration of hypoxia.
Although some of the generalized databases such as AmiGO (22), GeneCards (23), ArrayExpress (24), are present and are highly referred to by the researchers working in the field of hypoxia, these tools and databases show limited results.
This platform, which also provides a web server and web services for a huge list of bacteria, integrates a large list of databases, ranging from generalized databases, such as Uniprot, to specific databases that exploit protein domain information or sequence conservation.
The Jet Blue layer builds on the top of the generalized ESE database engine.
Two types of aspherical-atom refinements were performed: in invariom refinement (Dittrich et al., 2005 ▶, 2006 ▶, 2013 ▶) the molecular electron-density distribution is reconstructed from Hansen/Coppens' multipole-model parameter values (Hansen & Coppens, 1978 ▶) as tabulated in the generalized invariom database (Dittrich et al., 2013 ▶).
The proposed TDCAF is validated on three generalized image databases and three cloud databases, and the classification results outperform the other state-of-the-art methods.
