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When a new genome is known to belong to a member of an existing genus, all other genera can be unchecked from the "Genera selection" section below the sequence input box.
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Allopatry and biogeographic distribution patterns account for a considerable proportion of speciation within diverse phyllostomid genera where stabilising selection seems to constrain phenotypic and ecological variation [ 62- 64].
However, we cannot currently estimate the extent to which the relative abundance of different genera is influenced by selection at the level of nucleotide composition.
cis-NATs conserved across several different Brassicaceae genera may be under selection pressure because they have important roles since the last common ancestor of these species.
Our primary goal is to apply statistical frameworks using formal hypothesis tests to answer the following questions: 1) Can we detect significant differences in the strength of selection between genera?
The average pairwise distance for the control region between congeneric species has been reported 8.11% (ranging 0.54 26.24%) within a selection of bird genera [19].
3) Which sites show significantly different selection intensities between genera?
2) Do the proportions of sites under selection differ among genera?
Significance of p ≤ 0.05 was determined using χ2 with degrees of freedom (DF) equal to the number different parameters between models Because the REL approach used above does not indicate which codons show different dN/dS ratios, subsequent analyses were conducted to determine where along the S-RNase sequence selection differs between genera.
To summarize, the REL approach found significantly greater intensity of selection on positively selected sites in Physalis but no evidence that the proportion of sites under selection differed between genera.
From this, a preliminary selection of key species (genera, in some cases) was made.
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