Sentence examples for gene partitioning from inspiring English sources

Gene partitioning methods and estimates of the degree and direction of support of individual gene partitions to the overall data set are used.

To minimise the effect of saturation and also improve phylogenetic resolution of our multi-gene dataset, PartitionFinder v1.1.1 [ 63] was employed to select the optimal gene partitioning schemes and the best-fit model of nucleotide substitution for each partitioned dataset, under the Bayesian Information Criterion BICC).

Optimized DNA, gene partitioning, and construction oligos were generated by GeneDesign.

The unpartitioned and by gene partitioning strategy were analysed using the GTR + I + G model for all nucletotides.

One exception is that codon partitioning (PS2, PS6, and PS10) performed better than gene partitioning (PS3, PS7, and PS11).

With regards to the two SC regions, the gene content of each in both Nephroselmis cpDNAs fully conforms to the ancestral gene partitioning pattern.

However, there are few ciliate phylogenies based on combined gene partitions [6].

Following these preliminary analyses, two cryptic clades of apparent Microeuraphia species, both sampled in the TEP, were excluded because of inconsistencies among gene partitions and inconsistent placement among topologies chosen within gene partitions and concatenated data sets.

In this study, we consistently observed conflict between gene partitions within both species (ph test, p<.001), suggesting recombination between loci.

Rates of genetic change were set to vary freely among gene partitions and a prior root-to-tip divergence time estimate was set at 146 MY.

Branch lengths of the ML tree were optimized for each gene partition and the variance-covariance matrix of evolutionary rates was estimated using Estbranches.