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Filter 2. We normally used the family's gathering score as cutoff.
Here the gathering score cutoff implied an Infernal E-value cutoff of ∼30.
However, the gathering score cutoff imply an Infernal E-value cutoff of ∼1000 for the 5S rRNA family.
For the non-miRNA families we in most cases use the Infernal E-value cutoffs corresponding to the family specific gathering score cutoff level.
Each family comes with a gathering score cutoff, which is the recommended cutoff for scanning for new members of the family.
The U3 locus may be an incorrectly curated sequence in Rfam with a score only half of the gathering score cutoff.
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The Infernal results were filtered by the family specific gathering scores as well.
MP carried out the study gathering, scored the individual trials, participated in its design and coordination and wrote the manuscript.
Also, the cost of gathering, scoring and presenting questionnaire data on an individual basis has been deemed too costly or impractical in many instances [ 17, 18].
GR carried out the study gathering, scored the individual trials, participated in its design and coordination and helped to draft the manuscript.
The first step is developing clear scoring rubrics and then gathering and scoring a sufficiently large and diverse corpus of responses.
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