"Gathering threshold" was selected as cut-off; PfamB domains were not included.
Thus, a threshold is necessary to determine whether a sufficient number of temporal similar pixels are gathered; this threshold then can be used as a switch between temporal and spatial filters (in [21]), or as a parameter adjusting importance of the two filters (in our ASTC).
Gathering threshold is important in the case of GPCRs, because it helps to disambiguate between different GPCR families by selecting the most significant hit.
In three cases, 3PFDB+ profiles were helpful in discriminating insignificant PFAM domain assignments (as per the Gathering threshold (GA) scores, Supplementary Table S3).
Pfam domains of all genes were analyzed using Pfamscan v26 with default Gathering Threshold, and counts were generated using custom Perl scripts.
Judging from the number of parka-wrapped Montrealers gathered at the threshold, it was also clear that Jean-Louis Themis's kitchen -- open for only nine days a year, in late February and early March, and then only for three hours every afternoon -- was no longer a well-kept secret.
No evidence was gathered concerning a threshold, determined using these skills, after which an antidepressant is prescribed.
The gathering threshold of a specific Pfam Markov Model is the sequence-based cutoff at which the Pfam curators "gather" sequences to include in that Markov Model.
Each year, in a sacred rite, statues of the goddess Durga, made from dirt gathered from prostitutes' thresholds, where men are thought to have cast off their virtue, are taken in procession to the Ganges where worshipers look on as they dissolve in the muddy water.
Further, instead of using PFAM seeds for generating representative profiles, independent sequence sets gathered with an identity threshold of 50%, were used.
