Sentence examples for gaps were counted from inspiring English sources

Mismatches and gaps were counted, and the latter gaps were categorized for the nature of the underlying sequence.

As in [ 28], the third base of the anticodon triplet was excluded in the calculation of % similarity between two tRNA genes, but gaps were counted as mismatches.

The sequence similarity (gaps were counted as mismatching nucleotides) was 79, 72, 78 and 78% against the consensus sequence for the common marmoset (the MarAlp sequence described in the legend to Fig.  1), the tufted capuchin (DDBJ L07926), the pygmy marmoset (L07928), and the red-bellied titi (L07930), respectively.

Gaps are counted with a weight of one in both techniques, with leading alignment and trailing portions of curves treated as gaps.

To quantify the results, cells expressing GFP with or without EphA3 that migrated into the gap were counted.

Each mismatch and gap was counted as an error, and the average distance was computed as the number of errors divided by the total number of aligned bases.

Animals had to cross a notched bar 20 times, and every time that the back paw went through the gap was counted as an error.

Animals with both low quality and gapped alae were counted as only gapped alae so that each animal was represented only once.

IENFs immunoreactive to PGP 9.5, CGRP, SP, β-tubulin, and GAP-43 were counted in a blinded manner along the length of the tissue section (approximately 3 8 mm) according to the guidelines developed by the European Federation of Neurological Societies EFNSS) [ 28].

Positions with gaps for both sequences were counted as matched, while positions with a gap for only one sequence were counted as mismatched.

Another explanation for lower MBPCs could be that only frank chromatid breaks were counted and all gaps were excluded, whereas other studies counted gaps as well.