Sentence examples for gaps of length from inspiring English sources

I initially used relatively permissive criteria to define blocks: a minimum length of eight residues, with an average entropy of 0.4, at most two gaps of length one, and at most two sites with an entropy > 0.2.

Other options were left unchanged, including the default compositional adjustment of alignment score statistics and gap scores of −(11+ k) for gaps of length k.

The category, D b (X ), has a gap of length n or n − 1 if and only if D b (Y ) has a gap of the same length i.e. the gaps of length greater than n − 2 are a birational invariant.

Thus we focus on reads with divergence between 10%and30%0% as well as gaps of lengths up to 30 both in the read and genome.

For a sub-pattern P', which is derived by deleting one block of length c from P in between two inter-block gaps of lengths a and b and of relative flexibilities f a and f b respectively, the maximum length of the resultant new inter-block gap equals to a×(1 + f a) + b×(1 + f b) + c, and the minimum length of the resultant inter-block gap equals a×(1 - f a) + b×(1 - f b) + c.

Additionally, let (g) and (h) (resp. (g^{prime }) and (h^{prime })) be real values associated, respectively, with the first and subsequent spaces in a gap of length (l > 1) inside a highly conserved block (resp. conserved block).

This alignment only requires a gap of length two.

Then, the affine function is W a + W g ℓ, for a gap of length ℓ.

Conversely, if A has a gap of length at least s, then so does D b (X ).

HMMsearch introduced a gap of length 7 between the next-to-last (R52) and the last (Q53) residue in the sequence; in this case, the gap was removed, placing R52 directly next to Q53, thereby producing a better-quality alignment.

Each pair of neighbouring fragment sequences is either i) output contiguously if they match contiguous segments of the reference sequence, or ii) output separated by a gap of length equal to distance between the respective matching segments of the reference sequence (see Figure 2 and Implementation).