Sentence examples for gap cost from inspiring English sources

By John Cassidy November 8 , 2012In the last couple of days, there has been a lot of talk about how the gender gap cost Mitt Romney the election, and also about how Caucasian males, in deserting Obama en masse, are swimming against history.

We design efficient algorithms for the edit-distance between a CFG and an FA under these gap cost models.

ITS sequence identity values were obtained by searching the nucleotide collections at NCBI by MEGABLAST, with the scores of "match/mismatch score" and "gap cost" as "1, -2″ and "linear", respectively.

In particular, we consider three different gap cost models for the edit-distance that are crucial for finding a proper alignment between two bio sequences: the linear, affine and concave models.

The gap cost is calculated as p = o + g(l - 1), where o is the opening gap cost, g is the extending gap cost, and l is the length of the gap block.

The SeqAn library provides algorithms for fragment chaining with different gap cost models [ 12].

In addition to the linear gap cost model in CHAINER, the more flexible sum-of-pair gap cost model has been incorporated for the first time in a standalone tool.

Affine gap cost (or penalty) is a technique where the opening gap has different cost from an extending gap [ 38].

The general DP r-mesh uses O(n) processing units to handle all scoring schemes with affine gap cost.

With their greater gap cost flexibility, HMMs may be expected to have better retrieval accuracy than PSSMs.

It is furthermore important to allow affine gap cost functions since linear gap costs tend to disrupt correct alignments.