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The user manual of TephraProb, submitted as a supplementary file, provides in depth technical descriptions of all the functions of the package.
The remaining functions of the package stay unchanged.
All the functions of the package are written in C and R-wrapped.
Note that the functions of the package can deal with all regular Mathematica input and do not rely on DoFun.
The function lmFit was used to compute differential expression and statistics were extracted using ebayes (trend = TRUE) both functions of the package limma [ 28].
Finally, the initial maps of each LG were joined by using the three MLE objective functions of the package to generate three candidate maps.
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The interfaces and functions of the software package were introduced.
Ex2 Abstraction: Learners pack operations and recognize the abstract function of the package.
(j) User-defined model: If other power system models are required, user-defined models can be added in the model library to extend the function of the package. .
Estimation of model parameters and standard errors was carried out in R statistical environment, using the coxph function of the package survival and its robust variance estimator.
Optimization was performed using the default Nelder-Mead method of the mle function of the package stats4 in R [30].
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