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Functional data analyses, co-registration, and visualization were carried out using BrainVoyager QX 1.7 software (Brain Innovations, Maastricht, Netherlands).
'Ingenuity Pathway Analysis' software and AmiGO were used for functional data analyses.
MIM participated in conception and design, acquisition of administrative and functional data, analyses and interpretation of data.
These images were imported into mrTools, which was used to restrict the functional data analyses to gray matter voxels.
However, these predictions were conducted using computational tools and functional data analyses are therefore needed to validate the most likely effect of these substitutions on the protein functions.
Functional data analyses were conducted using Data Processing Assistant for Resting-State fMRI (DPARSF) programs [ 32] based on statistical parametric mapping (SPM8, http://www.fil.ion.ucl.ac.uk/spm/) and resting-state fMRI data analyses toolkits (REST, http://www.restfmri.net/).net/
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DEM was responsible for the experimental design, coordination of functional genomics data analyses and manuscript preparation and editing.
In 2007, Ashburner published a diffeomorphic registration algorithm (DARTEL) that improved the computational anatomy and functional MRI data analyses as they allowed for more precise intersubject alignments.
Functional data were analysed using an event-related design.
Functional data were analysed using FMRIB's expert analysis tool (FEAT, version 5.98).
During the onset of ischaemia functional data were analysed at high temporal resolution (1 s).
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