Sentence examples for functional annotation was performed from inspiring English sources
Functional annotation was performed by comparing BLAST hits with the annotated GO Pathways databases [ 96].
Further functional annotation was performed using PLAZA (version 3.0) comparative genomics and GO annotation was summarized using the Plant GO slim category.
The functional annotation was performed using the Blast2GO PRO version (Gotz et al. 2008) that describes the unigenes using the BLASTx algorithm (Altschul et al. 1990) with an E-value threshold of 1.0E−3 against the NCBI non-redundant (Nr) database to identify protein domains with the InterProScan (Zdobnov and Apweiler 2001) tool and assign the gene ontology (GO) and enzyme commission (EC) terms.
Functional annotation was performed by similarity analyses, using public databases and InterProScan analysis [81].
Functional annotation was performed using the Database for Annotation, Visualization, and Integrated Discovery (DAVID) [34].
Functional annotation was performed for gene list U and H using the database for annotation, visualization and integrated discovery (DAVID) (http://david.abcc.ncifcrf.gov/) [30].
Functional annotation was performed based on gene ontology (GO) for the 42 genes that were downregulated in RNAi-treated cells (Table 1).
Functional annotation was performed on the differentially expressed gene list using the DAVID functional annotation tools (http://david.abcc.ncifcrf.gov/) [ 44].
In addition, functional annotation was performed in Blast2Go (http://www.blast2go.com/) where gene information were obtain by blasting sequences in Gene Ontology (http://www.geneontology.org/).org/
Functional annotation was performed using the mouse genome database (Blake et al. 2014) The microarray data were submitted to the Array Express Home under accession no.
