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The set of all genes with counteracting function is identified by pathway searches.
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For genes not identified in this screen, the EC number of genes suspected to encode for a protein with enzymatic function was identified by browsing enzyme nomenclature databases (such as Expasy (http://www.expasy.org/enzyme/) or BRENDA (http://www.brenda-enzymes.org/)).org/
Genes and their putative function were identified by comparison of the sequences obtained here to the available annotated A. thaliana gene sequences.
Phospho-transfer and phospho-acceptor sites, as well as residues needed to confirm kinase/phosphatase-specific function, were identified by homology to Pfam annotations.
Numerous molecules involved in cellular adhesion and migration were present on the rank-product gene list, and the cellular movement function was identified by IPA to be affected by As exposure.
Lipin is a protein known for a long time to be implicated in lipodystrophies in mouse model systems (Peterfy et al. 2001; Carman and Han 2006; Reue and Zhang 2008; Csaki and Reue 2010; Han and Carman 2010), yet its enzymatic function was identified by studies in yeast (Han et al. 2006, 2007; O'Hara et al. 2006; Carman and Wu 2007).
The pressure modal admittance functions were identified by using a colligated least-square method.
First, permissible affine input functions are identified by a set of necessary and sufficient conditions for various conflict avoidance.
The coefficients in the functions are identified by the test data, while the uncertainties of the coefficients are quantified by the principal components analysis (PCA) and Monte Carlo (MC) simulations.
Genes related with different metabolic functions were identified by searching for homologous genes in P.putida genomes by using BLAST analysis of find gene in IMG web page using default parameter (Integrated Microbial Genome).
In this algorithm, the left and the right source-to-microphone transfer functions are identified by minimizing the error signal between microphone signal and an estimated source signal, i.e., (widehat {s} k)) [43, 44, 53] begin{array}{*{20}l} {e}_{l}(k) &= y_{l} k-L) - widehat{mathbf{h} k-L}^{T}widehat{mathbf{s}}(k), {e}_{r}(k) &= y_{r}(k-L) - widehat{mathbf{h}}_{l}^{T}widehat{mathbf{s}} k).
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Justyna Jupowicz-Kozak
CEO of Professional Science Editing for Scientists @ prosciediting.com