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In the case where different transcripts from the same sample were compared the metric RPKM or Reads Per Kilobase per Million reads was used.
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The five values from each sample were compared between all samples of the same type, i.e. 20 values per sample type, to form an average value and standard deviation.
Results from this sample were compared to the microarray results from the same sample.
The final haplotypes for each sample were compared to control data (complete mtGenome profiles previously developed from the same sample extracts [ 20]).
The absorbance of each sample was compared to that obtained from siblings from the same culture vial to control for parental and culture dependent effects.
Enriched regions from ERα +E2 and ERβ +E2 samples were compared with the same from ERα -E2 and ERβ -E2 samples, respectively.
Genotyping results from Taqman assays in the 22 EA DNA samples were compared with genotypes that were derived from resequencing in the same samples.
Each sample was compared to the standard sample B-190 of the same run.
Age distributions from fluvial sands in core samples were compared with samples from modern rivers and published bedrock ages.
All collected wtSPZ, RAS and liver stage samples were compared to the same RNA stock collected from P. yoelii mixed blood stages.
Shaded samples were compared with the exposed east-side samples taken from the same vines.
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