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The phrase "from the roots" is correct and usable in written English.
It can be used to refer to the origin or foundation of something, often in a metaphorical sense.
Example: "To truly understand the culture, we must explore it from the roots."
Alternatives: "at the core" or "from the ground up."
Exact(60)
The sap is still coming up from the roots".
These are short sprouts that grow vertically from the roots.
"We have to solve the problem from the roots".
Some onions were starting to split from the roots.
"What is being done today is separate from the roots.
A sedative and carminative also is obtained from the roots.
To efficiently separate essential oil from the roots and rhizomes of Asarum heterotropoides var.
In addition to nitrogen uptake from the roots, VsAMT1 may also contribute to interactions with rhizobia.
Soil microbial biomass carbon, however, decreased linearly as expected with increasing distance from the roots.
Five of the compounds were lactones extracted from the roots of the kava-kava plant.
A polysaccharide (SMP1) was isolated from the roots of Salvia miltiorrhiza.
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Since I tried Ludwig back in 2017, I have been constantly using it in both editing and translation. Ever since, I suggest it to my translators at ProSciEditing.

Justyna Jupowicz-Kozak
CEO of Professional Science Editing for Scientists @ prosciediting.com