Sentence examples for from alignment from inspiring English sources

Ambiguously aligned positions and gaps were excluded from alignment, leaving 805 unambiguously aligned positions; the alignment is available from the authors upon request.

Finally, we realigned our data using a second aligner Bowtie, and compared the strand bias scores computed from alignment bam files between Bowtie and BWA.

Rapidly evolving genes tend to resolve recent relationships, but suffer from alignment issues and increased homoplasy among distantly related species.

The partial sequence resulted from alignment and assembly of the ESTs of this cluster was used to obtain the full length of the Sra-til.

The modifications were based on predicted energetic status of residues and naturally occurred amino acids in each position of the enzyme sequence, extracted from alignment file of 150 homologous peroxidases.

Although we were able to align and determine consensus primer sets for the 9 tri5 and the 16 β-tubulin sequences, there was no consensus sequence that could be derived from alignment of the 11 rRNA sequences.

If the pre-optimized best overlap from alignment recycling is not sufficiently large (yielding an ST of at least 0.735), the conformer pair is considered to be incapable of being a neighbor.

We compare the reconstructions from alignment using cross-correlation and our center-of-mass technique, while also demonstrating the advantage of using many slices for the center-of-mass alignment, as opposed to just one center-of-mass calculation.

The resulting segmentation of the alumina particle is shown in 3-D in a video in the Additional file 2. Figure 6 Results from alignment in [ 15 ] and our approach.

The weighting is proposed to accelerate the convergence of dynamic programming and correct for effects arising from alignment lengths.

This analysis compares the goodness of fit of phylogenies inferred from alignment fragments under the maximum likelihood framework using the corrected Akaike Information Criterion.