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This process is repeated until all frequent sequences are considered.
Using PRISM algorithm [10], all found frequent sequences are stored in a prefix-tree.
The second main result is that, although the most frequent sequences are quite similar among species, there are some species-specific differences.
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Consequently, to see the difference in time between MSR_PreTree and IMSR_PreTree, we perform experiments on some databases in which the number of frequent sequences is very large.
A frequent sequence is also called a sequential pattern.
The average ratio between the total number of reads for the more frequent and the less frequent sequence was 201∶1, compared with 16∶1 for 4,460 randomly selected pairs, indicating that the less frequent sequence in many such pairs resulted from sequencing errors (the correct sequence is likely to be much more abundant than the artifact).
The most frequent sequence was "Intermediate-Intermediate-Intermediate" and concerned 873 women (34.7 %).
Amongst the protease sequences, 11,206 sequences are represented only once, and the most frequent sequence was represented 257 times.
To investigate whether this NAGNAG motif in mammalian species is also present in higher plants, we isolated 32 bp flanking the splice site for each of the delta bp values ranging from two to 10. Pictograms representing the base frequency at each position about the AA variation are displayed in Figure 6 and confirm that the most frequent sequence is a tandem repeat of CAGCAG [ 39].
Others thought his self-serving videos, with their frequent beheading sequences, were counter-productive or simply "un-Afghan".
Then, in the ESM phase, we randomly partition the input database into several sub-databases, and use a partition-based ESM technique to find expected frequent sequences, which are a subset of candidate frequent sequences and more likely to be frequent.
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Justyna Jupowicz-Kozak
CEO of Professional Science Editing for Scientists @ prosciediting.com