Sentence examples for frequent pathways from inspiring English sources

The Kobas toolkit [ 38] was used to infer the frequent pathways in every topologically separated module.

It enriches the top frequent pathways in a given list of pathways, which helps in discovering pathway markers.

In the pathway-protein association analysis, a list of 42 rat proteins differentially expressed with statistical significance between FL_vs_CTRL and L_vs_CTRL is used to identify topmost frequent pathways.

For example, the phenylalanine, tyrosine and tryptophan biosynthesis pathway was one of the most frequent pathways when considering only the PC measurement results and was not common for other measured traits [(See Additional file 11: Figure S4) and Fig.  5].

However, the most frequent pathway that leads to the mucoid phenotype is the acquisition of loss-of-function mutations in a single gene, mucA, which encodes for a negative regulator of alginate production [18].

Finally, a relatively less frequent pathway that also involves the PIPDA is the root of mesentery (RoM) pathway of spread.

Table 7 and Table 8 further show the top 25 most frequent pathway mentions detected in the AD corpora.

We also demonstrated that PathNER could provide a curation support by providing reliable curation suggestions from most frequent pathway mentions in the primary literature associated to a particular disease.

A second, less frequent pathway involves a single endonucleolytic cleavage generating a 32S form containing a 5′ extension of a few nucleotides (Schmitt and Clayton, 1993; Chu et al, 1994; Henry et al, 1994).

In addition, phenylalanine, tyrosine and tryptophan biosynthesis, purine metabolism and the pentose phosphate pathway are the most frequent significant pathways associated with all measured traits in the KEGG biological pathway analysis.

The most frequent significant pathways, considering all traits except PC, included purine metabolism, glycosaminoglycan biosynthesis heparan sulfate/heparin, the pentose phosphate pathway, and peroxisome and vascular smooth muscle contraction (Fig.  6) and (See Additional file 11: Figure S4).