However, the juxtaposition of frequencies of elements encountered in both repositories (for the 1971 analysis, data published by Crowe et al. [46] is used) as presented in Table 1 reveals similarities and differences at the level of element distribution.
We also examined the population frequencies of elements that differ by length categories.
For the related SNPs of each gene, frequencies of elements in a twin pair are very similar and sometimes identical.
To predict tissue-specific differentially methylated regions (DMRs), Previti et al. used CpG island specific attributes, attributes of repetitive elements, number and frequency of PhastCons elements, as well as structural and physicochemical properties.
2) Both in the 10- and 8-element sequences the frequency of the elements was not balanced.
To accomplish this, we generated a library of shared conserved sequence elements within SOG enhancers, measured the frequency of these elements within SOG and non-SOG CSCs, and preprocessed this information for elements occurring predominantly in SOG enhancers.
We measured the duration and the mean peak frequency (MPF) of elements using sound analysis software developed by R. Lachlan ("Luscinia," R. Lachlan, Leiden University, The Netherlands, http://luscinia.sourceforge.net).net
flavipunctatus, E. tynerensis, and B a. nigriventris), the distribution suggests extensive ongoing proliferation, indicated by high relative frequencies of element copies with sequence divergence ≤1% from the consensus (Novick et al. 2010).
The average frequency of TR elements was higher than the average frequency of FL elements in all populations; however, this difference was not statistically significant in the Everglades and North Carolina populations.
Assuming a normal distribution of the frequency of sampled elements from the control regions, the frequency of TE elements in the MEG or VAL genes and their environs is seen to be well above that randomly expected, with a P value lower than 0.05 for all cases analyzed (fig. 2), except for SmAlpha enrichment in VAL genes that did not achieve statistical significance (data not shown).
