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Comparison of residue frequencies was done using a chi square test.
Comparison of frequencies was done using the χ2 test.
Comparison of frequencies was done using the χ test.
Comparison of allele frequencies was done using a two by two contingency table with a chi-square test.
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Comparisons of frequencies were done using a χ-test or Fisher's exact test.
Haplotype identification and estimation of haplotype frequencies were done using PHASE for Windows, version 2.1 (http://stephenslab.uchicago.edu/software.html phase, last accessed March 3, 2014) (Stephens et al. 2001; Stephens and Donnelly 2003).
Allele frequency comparison was done using 2 × 2 contingency tables.
Spatial frequency analysis was done using standard methods [6].
Basic frequency analysis was done using Microsoft® EXCEL.
Frequency comparison was done using the χ2-test.
Covariance analysis to determine within and between species CAZyme domain class relative frequency variation was done using SAS v9.3 (Statistical Analysis Software -SAS Institute Inc).. Diversity of CAZyme domains were analyzed by grouping and counting all the individual domains present in each genome (including each domain in multi-domain proteins) into their families based on dbCAN annotations.
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