As we wanted the participating teachers to talk freely, we processed the information we gathered from teacher teams or individual teachers anonymously.
LC/MS data generated from untargeted metabolomics experiments are typically processed using freely available bioinformatics software such as XCMS, OpenMS, apLCMS, xMSanalyzer, mzMatch, or MZmine.
This freely moving dislocation processes a glide in the crystal.
All the processed data are freely available upon request (see http://www.eucentre.it/nam-project).
Images were processed using the freely available software ImageJ (http://rsb.info.nih.gov.gate1.inist.fr/ij/) complemented with the LOCI bioformat plug-in (http://www.loci.wisc.edu/ome/formats.html) to open images generated by the Leica SP5 confocal system.
The images were processed with a freely available pipeline [ 27] (for software see [ 28]).
To obtain a list of proteins significantly affected by the treatment with losartan, the data were processed using the freely available Perseus software (Cox et al, 2011).
The and ion mode datasets from each sample were respectively processed with the freely available XCMS suite [ 52, 55] downloadable at http://xcmsonline.scripps.edu/ for automatic peak extraction, retention time shift correction, peak grouping and alignment.
All pyrograms were processed using the freely available AMDIS software [ 21] using optimized parameters as given in the method section, yielding up to 512 deconvoluted components in B. braunii.
A number of voxels ranging from 5 to 27 inside the soleus were selected for further analysis and were processed using the freely available 3DiCSI package (version 1.9.11; Columbia University, New York, NY, USA).
