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This software will be made available freely on request to the first author; however, its use is not critical to this work, and alternative concept-searching software, such as the popular CLUE browser http://www.clininfo.co.uk, could have been used.
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The script is freely available on request.
The software and its manual are freely available on request.
The pathway-based modelling approach presented here has been implemented into a computing-platform independent software tool, which is freely available on request from the authors.
These data sets suggest that even deeper sequencing with the Sm454 library would still yield significant novel transcript discovery and increases in average contig length (our 454 library is freely available on request).
The corrected and deduplicated combination used for the totals in Table 1 and Table S1 is not currently in the public domain but is freely obtainable on request from author TR.
Availability: Software is freely available on request.
The analysis pipeline has been written in R [ 15] and is freely available on request.
None: the software whose use is described in this paper will be made freely available on request.
Indeed, an important future use of the phantom, freely available on request, will be to undertake calibrations in more centres.
The software used by the author to perform the mapping will be made freely available on request.
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