A procedure similar to 3' rapid amplification of cDNA ends (RACE) was used to obtain 3' cDNA fragments for identification of the transcripts from which the signatures were derived (thus, they are referred to hereafter in the text as "RACE" products, reactions, etc).
Sequence alignment, secondary structure prediction, and tertiary structure prediction were used to design NCOA4 fragments for identification of the ferritin-binding domain.
Figures showing the chemical shift perturbations of the PRDX5 protein upon addition of fragments, identification of the binding region for the 6 hit fragments, superposition of the docked structure of fragment F152 with the X-ray structure of the benzoate, and the plot of the dose-response relationship of the inhibition of PRDX5 by F152.
Taken together, the results further demonstrate that DMDSSO cross-linked peptides indeed produce specific MS2 fragmentation patterns that are predictable and reliable for the determination of their cross-link types, which allows subsequent MS3 analysis of unique MS2 fragments for unambiguous identification of cross-linked peptides.
Furthermore, the SSBM strategy can also contribute to improve the quality of the genome assembly by identifying misassembled fragments through the identification of SNPs at regular intervals.
In tropical forest fragments, the identification of undisturbed interior conditions is often pivotal for management plans and conservation practices, especially in small fragments.
The PANalytical X'Pert PRO XRD was performed on the fragments for the identification of inorganic pigments in a crystalline form.
Especially, tandem mass spectrometry can provide highly informative fragments for structural identification of glycoproteins.
Sequencing of amplified fragments allowed the identification of Cryptosporidum muris in three samples of Rattus rattus, and two genotypes of Cryptosporidium, the genotypes mouse II and III.
It is normally completely melted or vaporized, the thinking goes, so the identification of fragments of impactors depends on the use of indirect chemical tracers.
In this paper, we describe the first identification of fragments of the melted core that were entrapped by the Cs-particles and transported away from the reactor site, some 4 kilometers.
