Missing data methods consisted of discarding data (DROP), additional effect parameter for the group with missing data (EXTRA), and mixture methods in which the mixing probability was fixed to the observed fraction of categories (MIXobs), based on the likelihood of the concentration data (MIXconc), or combined likelihood of observed covariate data and concentration data (MIXjoint).
Figure 13 The evolution of the relative fractions of categories.
In Figure 13 we present the fraction of each category as a function of time.
Thus, although some "memory effect" genes may in fact not depend on Abf1 at all, this seems likely to represent a minor fraction of this category.
Categories reported by less than 5% not listed; b Columns indicate percentage of reported categories, fraction of spontaneously mentioned categories and whether a category was identified as most troubling; c Mean prominence based on values assigned to each reported category (0 = not reported, 1 = reported after probing, 2 = reported spontaneously, 3 = identified as most troubling).
Categories reported by less than 5% not listed; b Columns indicate percentage of reported categories, fraction of spontaneously mentioned categories and whether a category was identified as most important; c Mean prominence based on values assigned to each reported category (0 = not reported, 1 = reported after probing, 2 = reported spontaneously, 3 = identified as most important).
Categories reported by less than 5% not listed; b Columns indicate percentage of reported categories, fraction of spontaneously mentioned categories and whether a category was identified as most helpful; c Mean prominence based on values assigned to each reported category (0 = not reported, 1 = reported after probing, 2 = reported spontaneously, 3 = identified as most helpful).
A substantial fraction of GO categories was found to be assigned to genes with either unusually short or unusually long loci.
However, the fractions of UTR category in lineage-specific HCNSs were lower than those in non-lineage specific vertebrates in UTRs (∼6%).
