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All the Alu elements in the above transcripts were found to be edited except for THRAP1 (Figure 2A).
Only one of the sites found to be edited in RNA sequences was not predicted as edited by PREP-Mt.
Considering the surprising results observed in the recurrence of Case 4, we decided to analyze in this patient additional recoding editing sites previously found to be edited, mainly or partially, by ADAR2.
Another of the missing sites (in the first exon of nad1) was also found to be edited at a frequency of >80%%, and two other sites (in mttB and the fourth exon of nad2) were found to exhibit evidence of editing albeit at a frequency below the 20%% cutoff applied in our study (Additional file 1: Table S7).
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The disrupted RNA editing was found to be mediated by differential expression of ADARs in HCC (Chan et al., 2013).
The average amount of editing sites in non-parasitic higher land plants is around 30. 17 potential editing sites were identified in C. reflexa, from which eleven were found to be completely edited, four are partially edited and two were found to remain unedited.
The videos were later found to be "deceptively edited" by an independent investigator.
Similar results were observed for the actVA-ORF5 target, where eight out of eight randomly selected exconjugants were found to be correctly edited.
Certain of the tapes duplicate others partially, fully, or are found to be re-edited or "composite" versions.
Because the position 103 in rpl20 was also found not to be edited in C. gronovii, it could be possible that the resulting isoform of Rpl20 with a serine at position 103, is specific for the genus Cuscuta.
Two editing events restore a start methionine (ccsAeU2TM and rpl23eU2TM), and three were found to be only partially edited.
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