Sentence examples similar to format of the annotation from inspiring English sources

The format of this annotation file is inspired from the GO annotation file format (see http://www.geneontology.org/GO.format.gaf-2_0.shtml), and the procedure to provide supporting information is inspired from the guide to GO evidence codes (see http://www.geneontology.org/GO.evidence.shtml); additionally, the procedure follows the guidelines described here.

kcGEXM uses the genePred and BED files as input: kcGEXM -f gp -r merged.tmap.gp accepted_hits.bed > sample_name.cnt where -f precedes the format of the reference annotation file and -r precedes the reference annotation file.

Though Mediawiki offers contributors the ability to easily add annotations to genes or other items detailed by its web pages, the format of these annotations is often free-form.

Genomic coordinates of mature miRNAs were extracted (in BED format) from the annotation file in miRBase version 18.

The user required a tab-delimited formatted file of the annotation set, this can be obtained by selecting the download options 'Tab-SeparatedAssociationes) or 'Association' (Gene Association File format) at the bottom of the annotation table the file will be downloaded to your computer.

The annotation can be exported in RDF format according to the Annotation Ontology (AO) (8).

Here we present Jitterbug, a tool that identifies novel transposable element insertions in a sequenced sample with respect to a reference genome, based solely on the mapped reads in BAM format and the annotation of TEs in the reference.

The software reads in csv format the annotation file of the whole transcriptome and then lets to state one or more classificatory filters to run the algorithm.

To illustrate how this can be done in the PSI-MI format, the annotation of the positive effect of Cdk2 phosphorylation by Cdk7 on the catalysis of Cdc6 phosphorylation will be used as an example.

We strongly believe that a common format for different levels of the annotation process will enhance the utility of text mining tools and allow speedier progress in the field.

For choosing the annotation format of the CHEMDNER corpus, several criteria were important.