The outputs of the BioC NLP pipeline programs provide examples of how the BioC format links the results of different tools in an interoperable and integrated fashion.
The top-ranked Internet search engine Google has expanded its index to include material in Microsoft Word, Excel and PowerPoint documents and other business and academic file formats linked from Web pages.
Furthermore, it reduces coupling because developers are not bound to use message formats linked to a specific service implementation [7].
A 'one-stop shop' portal is under development for those seeking data-sharing policy documents and information about the standards (checklists, ontologies and file-formats), linking to exiting resources, such as MIBBI.
He saw in the traditional blog format — links with commentary, presented in reverse chronological order — the potential for a leaner, more accountable publishing model aimed at niche audiences, or verticals, that could be bundled together when selling advertising.
The HTML output format links the identifiers with the corresponding web pages (Table 3) from the KEGG, Ensembl, HGNC or Amigo web sites.
While XML/RDF may be the most general format for linked data, many applications and developers will find it easier to consume simpler formats and data models, for instance JSON, and these should be offered as alternatives.
These data sets were transformed using custom Perl scripts into a general format that linked genes together by their common associations.
i-Tracker software has been developed to extract reporter ion peak ratios from non-centroided tandem MS peak lists in a format easily linked to the results of protein identification tools such as Mascot and Sequest.
APIs in standard formats, Linked Data using RDF and Domain Modelling are examples that are fast becoming the orthodoxy.
