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For the 4331 genes for which ratio and p-values were calculated, the GC content displayed the same distribution in all subsets, "conservative ", " rejected", and "undetermined " (data not shown).
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We next identified genes with sex-differential transcript isoform ratios as genes for which the ratio of isoform expression in one sex is different from the ratio in the other sex (Table 3 and Additional file 11).
The established equations, i.e. Eq. (4), can be employed for the NIL condition for which the ratio of indenter width to the polymer thickness (polymer supply ratio) is more than 1.
For each probe set, we compute a ratio of the variance of the expression levels between replicates to the expression variance between cell lines, and we keep only probe sets for which this ratio is sufficiently low; the threshold we use is the first quartile of this ratio among all probe sets.
Similar to binary outcome analysis for which both ratio and difference methods are available, this straightforward method provides researchers the option of using a ratio method in addition to difference methods for analyzing continuous outcomes.
Domains represented by less than 3 TFs, or for which the ratio F a / F b was lower than 0.1 were removed, and the odds-ratios F a / F b /(F c / F d ) were calculated.
Only those frames for which this ratio exceeds a certain threshold are chosen.
These 38 container ports were selected covering all ports in the world for which the ratio of transshipment TEUs to local cargo TEUs is greater than 0.5.
We present a level set method on non-graded adaptive Cartesian grids, i.e. grids for which the ratio between adjacent cells is not constrained.
A compensation of these quantities was shown, i.e. their values were found for which the ratio of weight- to number-average molecular weight, Mw/Mn, was constant.
We calculate the ratio of the maximum amplitude of each set of observed and synthetic waveforms for each time window and exclude records for which the ratio is greater than 3 or less than 0.33.
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