Sentence examples for for tree generation from inspiring English sources

The online tool (http://pubmlst.org/) of the PHYLIP suite programs and Phylodendron [18] were implemented for tree generation, output, and display.

The parameters of the birth-death process for tree generation with species sampling [89] were fixed at λ = μ = 1 and ρ = 0, so that the priors were similar to those used in previous mitogenomic studies using MULTIDIVTIME [27], [37], [90].

This finding has important implications for tree generation and interpretation in the absence of sufficient genomic sequence information, since empirical forensic techniques are often used for tree prediction.

The A. queenslandica ADAT gene AD domain is included as an outgroup but was not explicitly designated as such for tree generation.

Two statistical methods were used for tree generation: (i) neighbor-joining (NJ) method with poison correction and bootstrap analysis with 1000 replicates, (ii) maximum parsimony (MP) method with 1000 bootstrap replications.

The observed clustering is robust in respect to the method used for tree generation (same for maximum parsimony or neighbour joining trees with JTT distance and gamma-distributed variable rates).

This paper brings systematic methods for scenario tree generation to the attention of the Process Systems Engineering community.

A graphical example for the tree generation and layout modification is given in Figure 2. Figure 2 Complex tree generation.

Machine learning was applied for decision tree generation by 10-fold cross-validation.

For phylogenetic tree generation, completed genomes were aligned using MAFFT [ 39, 40] via the CIPRES science gateway [ 41].

These MSAs were used as seed sequences for phylogenetic tree generation using Jones-Taylor-Thornton (JTT) model [ 77].