Sentence examples for for the annotated from inspiring English sources

We calculated the RPKM value for these parts for every condition in the same manner as for the annotated genes.

The relative level of expression was calculated by using the amount of uniquely mapped reads for the annotated genes.

Overall the data confirm that StPDX1.2 and StPDX1.3 are expressed in potato and demonstrate that this is also seen for the annotated StPDX2 gene.

We observed that, like for the annotated RefSeq genes, the putative PASs showed an asymmetric distribution towards high CDIs while this was less evident for TSSs.

Primer pairs were designed such that the forward primer was common for the annotated and extended 3'UTR and we assured that at least one intron was present inside the amplified fragment, to exclude amplification of genomic DNA.

The results presented in this paper build a framework for an integration of genomics and genetics, by using available marker data in conjunction with positional and sequence information for the annotated NB-LRR genes.

In cases where the original annotation appears to have misidentified the exon/intron junctions or start codons, the flanking sequence for the annotated gene region was reanalyzed and annotated manually by searching for extended ORFs and sequence similarity to the caleosin protein sequences from T. aestivum.

Fisher's exact test showed that the number of GO slim terms that were significantly different in annotation count between DECs and DEGs was least for the annotated contig set (Table  4).

An improved annotation of these mapped genes will have to wait for the annotated version of the Eucalyptus grandis genome.

This will facilitate an immediate start on important research into bacterial disease without having to wait for the annotated sequence to be published.

The GenBank accession number for the annotated genome sequence of C. glutamicum ATCC 13032 and E. coli MG1655 is NC_006958 [47] and NC_000913 [48], respectively.