Sentence examples for for template selection from inspiring English sources
The rule of thumb for template selection is to favor the proteins whose sequences align better with the targets in the important regions, such as the adenosine-5'-triphosphate (ATP -binding pocket in kinATP -bindingnsmembrane domains in G pocketn-coupled receptors (GPCRs).
In order to reduce computation and storage complexities, we also propose two methods for template selection: minimum distance template selection (MDTS) and maximum likelihood template selection (MLTS).
Uludag et al. [10] proposed two methods for template selection: DENT and MDIST, but MDIST method gets a better performance than DEND in their study.
Lumini and Nanni [11] presented a novel clustering method for template selection, and this method is better than MDIST in their study.
In comparison with the TIMIT phone recognition task, even though there were more GMMs to be used for test frame labeling and more templates in template clusters, the computation overhead did not increase much, especially for template selection and template compression.
Deeper insight into specific and important structural features of GPCRs as well as valuable information for template selection has been gained.
Figure 8 Phone accuracies (percent) for methods of template selection and compression with KL and LLR local distances.
Therefore these results suggest that structural information needs to be included in the decision process of template selection for homology model building.
GeneSilico MetaServer (https://genesilico.pl/meta2) [ 71] which uses a consensus approach to predict the template for model building was also employed to have better confidence and to ensure the sensitivity and accuracy of template selection for AGPase SS.
For all modeled sequences, there was good agreement between Pudge, PHYRE2, and I-tasser, in terms of template selection, and query to template alignment.
Uludag et al. [10] proposed two typical methods for automatic template selection: the first one, DEND, employs a hierarchical clustering strategy to choose a template set that could be best represents the intra-class variations.
