Sentence examples for for potential alignment from inspiring English sources

All alignments detected to be under positive selection at the codon level were curated manually for potential alignment errors.

The definitive experimental identification of such major groove-aligned mixed A·T·A·T and G·C·G·C tetrads within a quadruplex scaffold, has important implications for the potential alignment of duplex segments during homologous recombination.

Each possible path through the alignment matrix represents a potential alignment for the two sequences.

Also, we placed restrictions on the alignment window around candidate DIMs to exclude potential alignment artefacts.

YAHA now takes each potential alignment from above, and completes the calculation of the full alignment.

In order to discard potential alignment errors, not detected by our stringent filtering, the alignments corresponding to genes with P < 0.1 in the likelihood ratio test for positive selection were inspected visually.

CloudBurst parallelizes execution by seed, so each reducer evaluates all potential alignments for approximately 1/ N of the 4 s seeds, where N is the number of reducers.

For example, Bowtie did not return potential alignments where the reference sequence is shorter than the query sequence, whereas BWA returned all these possible alignments with equal scores.

As an alternative to heuristic scoring schemes, there have been also research efforts to develop probabilistic models for sequence alignment that can be used to evaluate and compare potential alignments and to estimate the symbol-to-symbol alignment probabilities.

The proposed method is based on a message-passing scheme, where messages are iteratively exchanged between neighboring symbol pairs to estimate the level of confidence for potential pairwise symbol alignments.

We also scanned the GHR alignment for potential indel signatures.