Sentence examples for for pathway construction from inspiring English sources

To simplify the optimization of biosynthetic systems, we recently reported a new cell-free framework for pathway construction and testing.

We also used the transcriptome data of C. quinquefasciatus for pathway construction and obtained a similar result.

Thus, the Pathway Editor represents a significant contribution to the list of current tools for pathway construction.

Despite the wealth of information found for pathway construction mainly from pathway databases, conflicting reports in pathway connectivity makes the construction of the generic topology a non-trivial task with significant manual curation and with no guaranteed for the "right" generic topology.

iPathCons can complete the following tasks: (i) annotating an insect transcriptome or gene sets for pathway construction; (ii) generating KGML files that can be opened by VANTED (22) and KEGG-ED (23); and (iii) generating links for each pathway showing the KEGG pathways.

After PESCADOR, results were manually curated and the gene biointeractions recovered were used to build a regulatory pathway in Keynote MacOS according to the markup language used by KEGG for pathway construction (KGML can be found at http://www.genome.jp/kegg/xml/docs/).jp/kegg/xml/docs/

For us the exercise of pathway construction has provided a resource for training, pathway modelling, literature/data interpretation, hypothesis generation and as such is now central to our ongoing investigations of macrophage biology.

The process of pathway construction relies heavily on domain knowledge.

For expression of the two pathways, two compatible vectors pTRCLA and pACYCLA were first constructed and details are provided in Additional file 2. For Ehrlich pathway construction, the kivd gene was amplified from Lactococcus lactis IL1403 with primer set kivd-F/kivd-R and digested with BamHI and XbaI and cloned into pUC18 cut with the same enzymes, creating pUCLA01.

We inspect a number of recent strategies for catabolic pathway construction and optimization and we bring them together by proposing an engineering workflow.

The strategies for chemotaxis pathway construction can be classified into two types according to whether they are adaptive.