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The quality values generally differ for individual clusters.
Sequencing of the PCR products acquired from testicular genomic DNA confirmed amplification of all four clusters in B6, since unique polymorphisms for individual clusters were present (Figure S1).
Descriptive statistics will be tabulated for individual clusters and aggregated across clusters.
The CAs for individual clusters and the integrations from all six clusters were calculated.
List of URDEGs for individual clusters obtained from six-way Venn analysis.
The genome representation was also calculated for individual clusters by summing GR values of the corresponding contigs.
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Consent rates for individual cluster varied from 56%to72%2% both extremes being intervention clusters.
We clustered these proteins using the BLASTCLUST program in several smaller clusters and prepared multiple alignments for the individual clusters and predicted secondary structure for these set using the PHD program.
The k-means result for five clusters using the square Euclidean distance metric is shown in Figure 2d, with the inset in the top right showing the mean IV curves for the individual clusters (color-coded respectively).
For comparison, individual clusters of interest can be outputted with all nodes present (Fig. 1B).
The gene lists for the individual clusters are provided in Additional File 1.
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