Exact(1)
The CN for each sample was assigned using CopyCaller™ software version 2.0 (Applied Biosystems), which uses relative quantitative analysis.
Similar(59)
Each sample was assigned to a molecular subtype using the PAM50 method [ 25].
Each sample was assigned a unique reverse primer containing the index used for barcoding.
Each sample was assigned a different forward/reverse index combination for sample-specific labelling.
H N-HSQC peaks for tH N-HSQCone resonances were assigned using a C,N-labeled sampeaksnd traditional triple resonance experiments (BMRB 19931).
Genes for tRNAs were assigned using the tRNAscan-SE program.
A small proportion of Swedish samples are unassigned using AIMs, whereas all are assigned using PCAIMs.
Diagnoses were assigned using Research Diagnostic Criteria [ 38]. 60 ml of blood sample was taken from each individual for DNA analysis.
Alleles were assigned using GeneMapper Software v37 (Applied Biosystems).
Haplotypes were assigned using PHASE (version 2.1).
Further, one sample was assigned to South Italy.
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