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MPI-based parallel implementation is employed for each module of the simulator.
Second we used gene set enrichment analysis (GSEA) and computed gene module enrichment scores (ES) for each module of genes that are either co-expressed with Egr1 (positive ES) or anti-coexpressed (negative ES) (Additional file 1: Figure S1).
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Only one measurement was recorded for each module on the day of measurement.
We calculated the β-diversity values for each module to quantify the degree of the heterogeneity at the local level (each module) for various phenotypic states.
jActiveModules selects a subset of samples for each module to maximize the score.
Drive block for each module consists of two stepper motors that allow bending toward the axes X and Y.
Since each vSLAM algorithm employs different methodologies for each module, features of a vSLAM algorithm highly depend on the methodologies employed.
Notably, for each module, none of the genomic positions outside its genomic interval was in absolute linkage disequilibrium that is larger than 0.75.
For each module the significance of the enrichment of SNPs in the best 0.1, 1 and 5 percentile was compared to 1,000 randomly generated protein interaction networks with a similar number of proteins.
For each module, the number of reactions and metabolites contained in that module are determined.
For each module, the top 10% of genes with the highest connectivity index (k.in).in
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