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Also, since I initially thought that the chemotype of either natal or host plant would be important, I employed a priori contrast codes to test for differences between the two chemotypes separately for both natal and host plant.
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contrast testing for differences between the three stem bending treatments.
2. We identified many genes that are differentially expressed between the two chemotypes, including some unique genes in each branch.
Therefore, we were surprised to find a large proportion of genes differentially expressed between the two chemotypes.
We found differential expression of terpene biosynthetic genes between the two chemotypes that could contribute to chemical variation within this plant.
These genes are involved in a variety of processes within the plant and many could contribute to the regulation of secondary metabolism and thus contribute to the chemical variation between the two chemotypes.
To determine the genetic basis for the two chemotypes of Stachybotrys and to compare Stachybotrys to other trichothecene toxin producers including Fusarium and Trichoderma, the genomes of four cultured Stachybotrys strains were sequenced and assembled de novo.
Padovan et al. reported consistent and discontinuous differences in three distinct groups of plant secondary metabolites (monoterpenes, sesquiterpenes and formylated phloroglucinol compounds (FPCs)) between the leaves of the two chemotypes [ 17], which have persisted since the first chemical profiling was done [ 9].
Here we analyse the transcriptomes of leaves collected from the two chemotypes of the E. melliodora mosaic to investigate the functional genetic differences involved in the contrasting susceptibility to herbivory.
We further investigated specific transcripts that were differentially expressed in the transcriptomes of the two chemotypes.
The reason for the app differences between the two platforms remains a hot topic of debate.
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