Sentence examples for for better assembly from inspiring English sources

A higher N50 length and average length are considered as a benchmark for better assembly on contiguity.

In addition, while contigs generated through our assembly have high quality for use as references for RNA-Seq analysis, as discussed below on the three key points of contiguity, completeness, and correctness in assessing assembly quality, recent improvements in NGS technology can provide even better contig connectivity with longer reads length for better assembly than those applied in this study.

These results suggest that higher coverage depth is unnecessary for a better assembly result.

To balance between higher accuracy from longer k-mers and better assemblies for low expressed genes from short k-mers, we ran multiple assemblies to arrive at an optimal k-mer length for a better assembly.

Besides, for De Bruijn assemblers, Velvet produced better assembly result than SOAPdenovo when assembly of 75-mer shoreadsadatasetsets, because of the wider range of K value to be chosen in Velvet.

By combining these two behaviors, we explore the window in which fractionation yields both a better assembly, for the small sub-community, and a reasonable sampling of the diversity of the original community.

Furthermore, multiple k-mer approach applied in ABySS and Velvet has the capability of producing a better assembly for transcripts from both highly and lowly expressed genes.

We merged all the sequences from three libraries (another transgenic library was added for assembly) to use as the input data for assembly to obtain a better assembly result.

Of the four assemblies we generated using the three assemblers, the assembly generated by Newbler (optimized parameter) was selected for further analysis, since it used the largest quantity of sequencing reads for assembly and had relatively large assembly size, longer contig length, and better assembly integrity and completeness.

To obtain a better assembly result, two assembly methods (single k-mer method and multiple k-mer method) were used for the de novo assembly of our sequencing data.

To get a better assembly result, three assembly programs, Newbler (version 2.5.3), Mira (version 3.2.1) and Cap3 with default or optimized parameters were used for de novo assembly of our 454 sequencing data.