for best hit

USAGE SUMMARY

The phrase "for best hit" is not standard in written English and may be unclear without context.
It could be used in contexts related to achieving optimal results, such as in gaming or marketing, but it requires additional context for clarity. Example: "To maximize your chances of success, aim for best hit when targeting your audience."

⚠ May contain grammatical issues

Science

News & Media

Human-verified examples from authoritative sources

Exact Expressions

3 human-written examples

E-value for best hit 7-mer CAGGTGC/GCACCTG (2.6×10−8) represents the expected number of patterns which would be returned at random for a given probability.

Plosone

We queried by BLAST our entire set of RT domains against the CAMERA protein dataset and retrieved a total of 175 subject sequences, all of which have an LTR-RT for best hit by BLAST comparison with Genbank (data not shown).

BMC Genomics

Repeat masked sequences were aligned using blastx (Altschul et al. 1990) to the nonredundant protein database (Genbank) using an e-value cutoff of 1e−5 and the output was filtered for best hit using an in-house.xml parser to annotate BESs.

G3: Genes, Genomes, Genetics

Human-verified similar examples from authoritative sources

Similar Expressions

57 human-written examples

Two days after earning his fourth Gold Glove Award, he was named the National League Silver Slugger winner for best hitting first baseman.

Los Angeles Times

The evolutionary relationship of D. discoideum actin (Act8-type) across species was studied in a blast search for best hits in genomes of model organisms (Table 5) and with the MrBayes software [38].

Plosone

Also, for best hits with <98% identity, more than half were found on chromosomes other than 5D.

BMC Genomics

For PSI-BLAST E-value cutoff 1e-5 was used for best hits retrieval and all hits to eukaryotes and archaea were validated manually to eliminate false positives.

Biology Direct

Each EST sequence was translated using six-frame translation [ 44], and both DNA and protein sequences were compared to the corresponding best hits in Arabidopsis, respectively (see Table 3 for best hits), using CLUSTALW [ 45].

BMC Plant Biology

Putative gene orthologs exhibiting conserved arrangement in relation to the Halloween orthologs were tested for orthology by reciprocal best hit Blast searches in which orthologs of each species were BLAST searched against the genome of the other species to look for best hits (putative orthologs).

BMC Evolutionary Biology

Hyperlinks to RGAP, RAP-DB (for corresponding RAP gene loci), TAIR (for Arabidopsis best hit) and NCBI (for flanking tag sequence of Tos17 insertion) have also been provided to facilitate access to sequences associated with each rice TF.

Database : the journal of biological databases and curation

Bitscore and protein coverage were used as selection parameters for the best hit from each database and again for selecting the best hit across databases to build the unconstrained annotation library (Fig.  2).

BMC Plant Biology

Expert writing Tips

Best practice

Consider replacing "for best hit" with clearer alternatives like "for the best result" or "for optimal matching" to enhance clarity and readability.

Common error

Avoid using "for best hit" in contexts outside of specific technical fields (like bioinformatics). General audiences may not understand it, so use more accessible language.

Linguistic Context

The phrase "for best hit" functions as a prepositional phrase modifying an implied verb, typically in the context of search algorithms. It specifies the criterion for selecting a particular result, such as in a BLAST search. Ludwig AI indicates this phrase is not standard English, thus not grammatically correct.

Expression frequency: Rare

Frequent in

Science

67%

News & Media

33%

Formal & Business

0%

Less common in

Encyclopedias

0%

Wiki

0%

Reference

0%

Ludwig's WRAP-UP

The phrase "for best hit" is primarily used in scientific and technical contexts, particularly within bioinformatics, to indicate a search criterion focused on identifying the most significant or relevant result. While technically understandable in those fields, Ludwig AI suggests that it's not considered grammatically correct in standard English. Therefore, using clearer alternatives like "for the best result" or "for optimal matching" is recommended for broader audiences to enhance clarity and avoid jargon. The phrase's frequency is rare, and it's advisable to consider the intended audience and context when deciding whether to use it.

More alternative expressions

Phrases that express similar concepts, ordered by semantic similarity:

for the best result

Replaces "hit" with "result" to emphasize the outcome or consequence.

for the optimal match

Substitutes "hit" with "match" to highlight finding the most suitable pairing.

to achieve the best outcome

Emphasizes the intention to obtain the most favorable result.

in pursuit of the top result

Focuses on actively seeking the highest-ranking or most successful outcome.

aiming for the best possible result

Highlights the aspiration for the most favorable outcome attainable.

for maximum impact

Focuses on achieving the greatest effect or influence.

seeking the best possible outcome

Highlights the act of searching for the most favorable result attainable.

in search of the prime outcome

Focuses on the pursuit of the most desirable or excellent result.

targeting the perfect match

Emphasizes precisely aligning with an ideal pairing or combination.

striving for an excellent outcome

Highlights the effort towards attaining a notably good result.

FAQs

What does "for best hit" mean in the context of bioinformatics?

In bioinformatics, "for best hit" typically refers to the most significant or relevant result from a sequence alignment search, such as a BLAST search, indicating the closest match to a query sequence.

How can I rephrase "for best hit" to be more easily understood?

Consider using alternatives like "for the best match", "for the most significant result", or "for the optimal alignment" depending on the specific context.

Is "for best hit" grammatically correct in formal writing?

While understandable in certain technical contexts, "for best hit" is not considered standard or grammatically elegant in formal writing. Opt "for the best result" or "for the optimal match" instead.

What are some contexts where "for best hit" might be appropriate?

"For best hit" may be acceptable in highly specialized technical documentation or discussions within bioinformatics, where the meaning is clear to the intended audience. However, in broader contexts, clearer alternatives are preferred.