Sentence examples for for all alignments from inspiring English sources

Specifically, we used the local gapped alignment algorithm for all alignments, keeping the default parameters for mismatch and deletion costs.

For all alignments, PAUP* was used to determine percent sequence divergence, number of parsimony informative characters, and concordance with the Rickettsia species tree.

For all alignments evaluated, the score assigned by the three ANOLEA-based predictors and the mean Cα RMSD between the models and the crystal structure are plotted in Figure 8.

Inter-molecular distances were calculated for all alignments whose representative sequence was present on multiple chains annotated by the PDB file as part of a biological unit (PDB REMARK 350) [24].

In the absence of splice-version specific sequence data of 3'UTRs in GBMs we accounted for all alignments of miRs and un-translated regions of a given mRNA.

A representative set of 47 different cCP sequences (List S1) was used both as a template for all alignments and as an outgroup together, when required, with that of ryegrass mosaic rymovirus (RGMV) as an outlier to the outgroup.

Lane departures were classified into lane keeping, lane departure to the left and lane departure to the right for all-alignments (Dataset I), and lane keeping, lane departure to the inside and lane departure to the outside for curves-only (Dataset II).

If at least two shared GO terms are used to determine FC, HubAlign greatly outperforms GHOST for all the alignments.

For all the alignment of interests and calculation of the larger political currents, some Uzbeks said the feeling of support was remarkable, given the physical and psychological distance between the two nations.

For all these alignment programs considerable user-designed secondary processing is necessary to arrive at a list of reliable SNPs and their properties.

For all alignment procedures we used PAM120 and Blosum62 as substitution matrices with uniform costs for gap opening and gap extension.