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The distribution of blastn hits (n = 61,553) for all aligned contigs (n = 56,084) and putative SNPs (n = 17,813) with respect to the bovine genome are shown in Figure S3.
The distribution of blastn hits (n = 19,667) for all aligned contigs (n = 18,301) and putative SNPs (n = 6,877) against the bovine genome is shown in Figure S1, with similar results for the 17,084 uniquely aligned contigs and 5,710 putative SNPs depicted in Figure S2.
The conservation methods will less often achieve high motif scores for all aligned genomes in the same loci, and this conservation filtering can therefore make them better at distinguishing between functional (and conserved) motifs and false positives, compared to PWM scanning.
Functional domains were detected for all aligned sequences using the HMMPFAM [ 84] database.
These plots show the cumulative proportion for all aligned contigs exceeding the contig size indicated on the x-axis.
The proportion of inconsistent positions was found for all aligned triples for each method at each threshold and calculated as a percentage.
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VENICE -- The weather may be picture-perfect, but the stars were not all aligned for the first day the giant Biennale was open to the art press and V.I.P.'s.
The cards are all aligned for this to be the year of the musical again".
Hence, the tampered region can be located by searching for all the aligned patches where the cues left by shifted compression exist.
(D ) Same as (B ) for all 16 aligned most frequently cleaved nucleosome positions.
Left-right V-plots with MNase and Cse4 ChIP/Input profiles superimposed for all centromeres aligned over the mid-Cen.
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Since I tried Ludwig back in 2017, I have been constantly using it in both editing and translation. Ever since, I suggest it to my translators at ProSciEditing.

Justyna Jupowicz-Kozak
CEO of Professional Science Editing for Scientists @ prosciediting.com