Sentence examples for for alignment to from inspiring English sources

The amplified PCR products (1200 bp) were ligated into plasmid pMD-19T and sequenced for alignment to that of the wild-type strain.

8,460 L1 elements with length over 6000 bp were identified and used for alignment to generate LINE nucleotide base matrix.

MeDUSA utilized BWA (v0.5.8) [ 44] for alignment to reference genomes.

In addition, we tested the assembled contigs for alignment to Aiptasia genomic DNA sequences.

Adjacent stacks had an overlap of around 10% for alignment to form the montage.

Autofluorescence images were subsequently downsized to 700 × 600 × 350 pixels for alignment to the reference space.

For alignments to introns and intergenic regions we only accepted reads that aligned exactly once in the entire genome.

For alignments to the IAdb, Novoalign (http://www.novocraft.com/) was used (version 2.05.20 [-o SAM -r A -R 0, default options] (http://www.novocraft.com/) which reports all locations and genomes mapped equally well by a given read pair.

Matches were also screened for alignments to multiple homologous prohormone genes that could indicate gene duplication events in the pig genome.

We used mouse (accession number BK000964), human (U13369), rat (X04084) and hamster (DQ235090) rDNA sequences for alignments, to design primers for PCR and ChIP experiments and for probe generation.

The degree of consistency represents an upper-bound on the information a method can provide about homologous relationships: consistency is necessary but not sufficient for alignments to be accurate in this regard.