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Bowtie, an ultrafast, memory-efficient short read aligner was used for aligning the sequencing reads [ 17].
Some aligners are designed especially for aligning the output of Illumina's Sequence Analyzer.
A variety of alignment algorithms have been designed for aligning the reads to the genome [ 11- 13].
Methods for aligning the feature model and for scoring the alignment are then presented.
SMETANA required the least computation time for pairwise network alignment and NetCoffee was the fastest among all for aligning the PPI networks of 3 species.
The program EST-e-mate utilizes ClustalW [51] for aligning the sequences, while keeping the reading frame intact with sequence alignments trimmed relative to the shortest sequence.
Critics lambasted her for aligning the government with the primary suspect.
This will serve as a guide for aligning the first row of tiles.
These values act as references for aligning the images taken during the follow-up period.
Two different 3D tracking mechanisms were employed for aligning the patient surface and the probe position to the MRI data.
Only a few simple and inexpensive tools are required: stencil paper, a stencil knife, paint applicators and, sometimes, a chalk line for aligning the patterns.
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