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From this list of frequencies, the expected folded site frequency spectrum was calculated, conditional on our ascertainment scheme.
The folded site frequency spectrum (SFS) for the genotyped SNPs is skewed toward common variants (Close et al. 2009).
The expectation of the folded site frequency spectrum was obtained using Hudson's "ms" program (Hudson 2002) and custom C++ code (Thornton 2003).
To characterize the within-subspecies variation, we analyzed the folded site frequency spectrum (SFS) for all SNPs and Syn and NSyn sites among WFDC genes (fig. 3).
Simulations indicated that the folded site frequency spectrum of synonymous variants was within the 95% confidence interval of the standard neutral model for all frequency classes except singletons, which were rarer than expected (results not shown).
Minor allele frequency in the populations of 10 wild emmer chromosomes and 13 T. aestivum chromosomes giving rise to the folded site frequency spectra were computed for each polymorphic A, B, and D genome locus.
Similar(49)
In the low coverage regime at θ = 0.25, H atom adsorbs at both two-folded and four-folded sites with a slight preference for the four-folded site.
In the full coverage regime, there is a clear distinction between two-folded and four-folded adsorption sites with a net preference for adsorption at four-folded site.
After filling all four-folded sites, it was found that occupation of two-folded followed by one-folded sites is possible while adsorption at nearby mixed two-folded and one-folded sites leads to H H recombination.
Despite their location within a folded protein, these sites can be converted by FGE in vitro, generating a reactive aldehyde for subsequent chemical glycosylation.
Small perforations (<5 mm) at the site of folded mucosa are reported to be healed by itself [4, 9].
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