Exact(10)
These results indicate that based on our experimental design, the 1.5- fold threshold criterion is too low to reliably detect genes that are differentially expressed over the time-course.
A 2.5 fold threshold and a 10-fold threshold identified the same transcripts as being over and under-represented in the two chemotypes, suggesting that a major reorganisation of gene expression had occurred.
Numbers in bold are above the 1.5 fold threshold but have a p-value above the statistically significant threshold.
Numbers in italics are below the 1.5 fold threshold but have a p-value below the statistically significant threshold.
This gene list was supplemented with genes that did not meet the fold threshold value but appeared to be co-regulated as a part of an operon.
Overall, a small number of genes were significantly up-regulated in this BraRoAZ plant (two fold threshold), while none appeared to be significantly down-regulated.
Similar(50)
Dashed lines represent a two-fold threshold in transcript abundance.
All three entry-defective mutants were unable to modulate the expression of IFN-λ above the arbitrary two-fold threshold.
Six percent of transcripts were altered at the two-fold threshold in placentas of manipulated embryos, 2/3 of transcripts being down-regulated.
States for the gene expression nodes were defined as up-regulation, down-regulation and unchanged expression, using a 2-fold threshold to convert microarray readouts to discrete values.
Transcripts for both BIRC-2 and BIRC-3 are increased above the two-fold threshold after inoculation with ΔgB and ΔgH HSV-1 but not ΔgD.
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