Your English writing platform
Discover LudwigSuggestions(1)
Exact(10)
Thirty distinct AMP structural fold clusters were detected and reported.
ADAM offers 136 AMP fold clusters built by TM-score for browsing.
The structural fold clusters can have the same CATH and SCOP annotations as cluster #1 in Table 4.
Among the 136 fold clusters in ADAM, 30 of them which contain more than one structure are displayed here.
In addition, the structural search allows users to retrieve the AMP information associated with specific PDB structures or ADAM fold clusters.
30 distinct AMP structural fold clusters with more than one structure are detected and about a thousand AMPs are associated with at least one structural fold cluster.
Similar(50)
The CUI was then used to determine the fold clustering of the collected A-pairs (76 750 entries).
The structural view displays the best corresponding PDB structure and, if available, the representative PDB structure of the fold cluster which this AMP sequence belongs to.
We present evidence that the folding pathways and kinetics of hierarchically folding clustered sequence are not adequately described in conventional MC simulations, and the account for cluster dynamics provided by CMC allows to capture essential features of the folding process.
Another example is stress response and protein folding cluster, the enriched gene function terms are stress response and protein folding, and the significant conditions are heat shock, diamide and osmolarity stress experiments.
These types include: two different primary response dynamics, Cluster 1 and 2 (onset time of 2 h, offset time after 12.5 h), which differ mainly in their expression ratios, whereas Cluster 1 is highly expressed along the experiment (peak above 3-fold), Cluster 2 has lower peak expression and returns to the base expression values after a relatively short time.
Write better and faster with AI suggestions while staying true to your unique style.
Since I tried Ludwig back in 2017, I have been constantly using it in both editing and translation. Ever since, I suggest it to my translators at ProSciEditing.

Justyna Jupowicz-Kozak
CEO of Professional Science Editing for Scientists @ prosciediting.com