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The transcript views provide an in depth focus on one transcript, or splice isoform, across individuals, breed or strains.

"As audience needs have changed with the shift to mobile consumption, and towards key ABC digital properties such as abc.net.au/news and apps, the need for this focus on transcripts has reduced, and the need for digital staff to create bespoke versions of stories and program items in text, video and audio formats is increasing," the note said.

Though most discussion here will focus on transcripts associated with a higher confidence level, many oligos associated with lower confidence changes may still be biologically relevant.

In silico studies focus on transcript- and gene abundance, identity, diversity, ontology, stability and complexity in maternal vs. zygotic developmental stages.

Of these, we specifically focus on transcripts whose pattern of expression peaks early in development.

The recognition of non-coding RNAs has also resulted in a greater focus on transcripts not containing open reading frames.

As we were looking for transcripts implicated in the function of Smn, we decided to focus on transcripts that are down-regulated in SMAv and SMAr motor neurons.

The vast amount of information generated here forced us to focus on transcripts associated with the generation and scavenging of reactive oxygen species as well as on transcripts associated with the maintenance of Na+ homeostasis, as example scenarios where intense transcriptome-remodelling is occurring after stress onset.

To understand the genetic underpinnings of differences in growth morphology between A. cervicornis and A. palmata, we focus on transcripts that were DE for both colony position and species with > 2-fold change in gene expression or were significant for the interaction between factors.

For CNV mapping, we decided to focus on transcripts of known genes as there is a wealth of information that can be used to predict their implication in autism, and their boundaries are well characterized in the human genome; upstream transcription start site regulatory motifs, or other non-coding sequence could be the object of another paper.

Another 25 genes of interest were selected from a transcriptomic study of ductal carcinoma in situ (DCIS) to invasive ductal carcinoma (IDC) progression, with a particular focus on transcripts that were up-regulated in the invasive component [ 26] (Additional file 1: Table S1).

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