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The American lineage has further diverged into multiple clades: Florida-1 clade predominates in North America and Florida-2 clade in Eurasia (4 ).
Of note, the prototype canine influenza virus is phylogenetically related to the Florida-1 clade of EIV.
Florida State 83, No. 21 Florida 79.
The H3 genes from the 2 Florida 2005 canine isolates formed a clade with high bootstrap support that included A/canine/Texas/2004 and A/canine/Iowa/2005.
Phylogenetic analysis places the B. floridae OR genes in a monophyletic clade with the vertebrate ORs.
All B. floridae ORs are members of a clade that contains no vertebrate sequences suggesting that a few OR genes have provided the raw material for gene family expansions just as in several vertebrate lineages.
The B. floridae Slc17a9 places most basal in the clade I, outside D. melanogaster and C. elegans.
The phylogeny also shows that all B. floridae candidate ORs belong to a monophyletic clade and that this clade is the sister group to type 1 vertebrate ORs.
Most nodes were supported by high bootstrap values (>92%), with the exception of the same clade (B. lanceolatum + B. floridae) as in ML analysis (56%).
The invertebrate species and also B. floridae have more than one gene in Clade III; the phylogenetic analysis suggests that this could be the outcome of local duplications.
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CEO of Professional Science Editing for Scientists @ prosciediting.com