Sentence examples for flanking length from inspiring English sources

We choose L1 and N1 to be any computationally convenient flanking length and population size.

The maximum expectation was set to 5.0 and flanking length around target site for target accessibility analysis was set to zero.

psRNATarget program was executed with parameters at their default settings i.e. score or maximum expectation at 3, length of complementary scoring at 20, target accessibility at 25, flanking length around target 17 bp upstream and 13 bp downstream and keeping range of central mismatch leading to translational inhibition in between 9 11.

The parameters were as follows - Maximum expectation: 3, Length for complementarity scoring: 20, Allowed maximum energy to unpair the target site (UPE): 25, Flanking length around target site for target accessibility analysis: 17 bp, Range of central mismatch leading to translation inhibition: 9 11 nt.

The following default parameters were applied: maximum expectation value, 3; target accessibility – allowed maximum energy to unpair the target site (UPE), 25; flanking length around the target site for target accessibility analysis, 17 bp upstream and 13 bp downstream; and the range of central mismatch leading to translational inhibition, 9 to 11 nt.

RNAmine performs well with little or no flanking region, but surprisingly exhibits a poor performance with increase in the flanking length.

Providing a test motif with symmetric flanking regions of same length on either side, makes it easy to align the motif in the middle (more challenging would be randomly differing flanking lengths or motifs located in different regions of the input sequences).

The flanking lengths were fixed at about 200 among the sequences containing the motif.

So, even though the sum of the flanking lengths (denoted as L f ℓ ) on either side are the same in all sequences, the motif position in each of the input sequences is randomly chosen and hence different in each input sequence.

Among these 191 ESTs sequences, 104 contained sufficient flanking sequences length for primer design.

All the new microsatellite-containing ESTs showed sufficient flanking sequence length for primer design, and 5,609 polymorphisms of them appeared polymorphic after in silico analysis.